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Bra000215 protein (Brassica rapa) - STRING interaction network
"Bra000215" - AT2G41140 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000215AT2G41140 (E=3e-291) CRK1, ATCRK1, ATCBK3 | CRK1 (CDPK-RELATED KINASE 1); calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ calmodulin-dependent protein kinase/ kinase (567 aa)    
Predicted Functional Partners:
Bra040770
AT1G32250 (E=7e-078) | calmodulin, putative (166 aa)
       
  0.864
Bra040379
AT3G07490 (E=1e-058) AGD11 | AGD11 (ARF-GAP domain 11); calcium ion binding (149 aa)
       
  0.864
Bra039845
AT2G15680 (E=6e-082) | calmodulin-related protein, putative (189 aa)
       
  0.864
Bra039723
AT4G14640 (E=6e-072) CAM8 | CAM8 (CALMODULIN 8); calcium ion binding (153 aa)
       
  0.864
Bra039511
AT5G44460 (E=2e-075) | calcium-binding protein, putative (182 aa)
       
  0.864
Bra039037
AT3G29000 (E=9e-041) | calcium-binding EF hand family protein (105 aa)
       
  0.864
Bra038801
AT4G20780 (E=2e-075) | calcium-binding protein, putative (261 aa)
       
  0.864
Bra019554
AT2G43290 (E=1e-080) MSS3 | MSS3 (multicopy suppressors of snf4 deficiency in yeast 3); calcium ion binding (169 aa)
       
  0.864
Bra036140
AT5G49480 (E=2e-064) ATCP1 | ATCP1 (Ca2+-binding protein 1); calcium ion binding (160 aa)
       
  0.864
Bra035972.1-P
AT2G43290 (E=3e-057) MSS3 | MSS3 (multicopy suppressors of snf4 deficiency in yeast 3); calcium ion binding (111 aa)
       
  0.864
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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