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Bra000294 protein (Brassica rapa) - STRING interaction network
"Bra000294" - AT2G43180 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000294AT2G43180 (E=5e-190) | catalytic (478 aa)    
Predicted Functional Partners:
Bra036771
AT1G36160 (E=0.0) ACC1, AT-ACC1, EMB22, GK, PAS3 | ACC1 (ACETYL-COENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase (2233 aa)
   
 
  0.958
Bra018702
AT1G36180 (E=0.0) ACC2 | ACC2 (ACETYL-COA CARBOXYLASE 2); acetyl-CoA carboxylase (2310 aa)
   
 
  0.958
Bra036142
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (729 aa)
   
 
  0.950
Bra020639
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (608 aa)
   
 
  0.950
Bra037657
AT2G44350 (E=3e-249) ATCS, CSY4 | ATCS; ATP binding / ATP citrate synthase/ citrate (SI)-synthase (475 aa)
   
 
  0.695
Bra014554
AT3G58750 (E=1e-219) CSY2 | CSY2 (citrate synthase 2); citrate (SI)-synthase (470 aa)
   
 
  0.695
Bra014513
AT3G60100 (E=2e-221) CSY5 | CSY5 (citrate synthase 5); citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer (472 aa)
   
 
  0.695
Bra007417
AT3G58750 (E=6e-272) CSY2 | CSY2 (citrate synthase 2); citrate (SI)-synthase (507 aa)
   
 
  0.695
Bra007416
AT3G58750 (E=2e-133) CSY2 | CSY2 (citrate synthase 2); citrate (SI)-synthase (449 aa)
   
 
  0.695
Bra004720
AT2G42790 (E=4e-271) CSY3 | CSY3 (citrate synthase 3); citrate (SI)-synthase (510 aa)
   
 
  0.695
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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