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Bra000340 protein (Brassica rapa) - STRING interaction network
"Bra000340" - AT2G44080 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000340AT2G44080 (E=3e-023) ARL | ARL (ARGOS-LIKE) (137 aa)    
Predicted Functional Partners:
Bra016947
AT2G41230 (E=3e-009) | unknown protein (88 aa)
     
   
  0.416
Bra032062.1-P
AT2G24765 (E=2e-094) ARF3, ARL1, ATARL1 | ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding ; GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus (182 aa)
           
  0.408
ARF1
AT2G24765 (E=2e-094) ARF3, ARL1, ATARL1 | ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding ; GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus (182 aa)
           
  0.408
Bra036410
AT2G15310 (E=3e-095) ATARFB1A | ATARFB1A (ADP-ribosylation factor B1A); GTP binding (420 aa)
           
  0.406
Bra021371
AT3G03120 (E=3e-107) ATARFB1C | ATARFB1C (ADP-ribosylation factor B1C); GTP binding (192 aa)
           
  0.406
Bra008579
AT5G17060 (E=1e-107) ATARFB1B | ATARFB1B; GTP binding (192 aa)
           
  0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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