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Bra000353 protein (Brassica rapa) - STRING interaction network
"Bra000353" - AT2G44440 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000353AT2G44440 (E=8e-118) | emsy N terminus domain-containing protein / ENT domain-containing protein (531 aa)    
Predicted Functional Partners:
Bra038213
AT3G19510 (E=5e-214) HAT3.1 | HAT3.1; DNA binding / sequence-specific DNA binding / transcription activator/ transcription factor (709 aa)
     
      0.621
Bra022429
AT3G19510 (E=3e-189) HAT3.1 | HAT3.1; DNA binding / sequence-specific DNA binding / transcription activator/ transcription factor (737 aa)
     
      0.621
Bra011153
AT4G29940 (E=4e-215) PRHA | PRHA (PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A); protein binding / sequence-specific DNA binding / transcription activator/ transcription factor (841 aa)
     
      0.621
Bra010310
AT4G29940 (E=1e-194) PRHA | PRHA (PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A); protein binding / sequence-specific DNA binding / transcription activator/ transcription factor (834 aa)
     
      0.621
Bra037060
AT4G00020 (E=0.0) MEE43, EDA20, BRCA2(IV), BRCA2A | protein binding / single-stranded DNA binding (1158 aa)
       
 
  0.422
Bra005674
AT4G00020 (E=3e-211) MEE43, EDA20, BRCA2(IV), BRCA2A | protein binding / single-stranded DNA binding (1060 aa)
       
 
  0.422
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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