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Bra000373 protein (Brassica rapa) - STRING interaction network
"Bra000373" - AT2G45130 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000373AT2G45130 (E=1e-108) ATSPX3, SPX3 | SPX3 (SPX DOMAIN GENE 3) (246 aa)    
Predicted Functional Partners:
Bra016446
AT1G20860 (E=6e-251) | phosphate transporter family protein (542 aa)
     
   
  0.476
Bra008260
AT1G76430 (E=1e-255) | phosphate transporter family protein (538 aa)
     
   
  0.476
Bra003719
AT1G76430 (E=1e-266) | phosphate transporter family protein (534 aa)
     
   
  0.476
Bra034426
AT4G22990 (E=2e-220) | SPX (SYG1/Pho81/XPR1) domain-containing protein (676 aa)
     
   
  0.411
Bra010355
AT4G28610 (E=3e-131) PHR1, AtPHR1 | PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor (396 aa)
           
  0.410
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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