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Bra000377 protein (Brassica rapa) - STRING interaction network
"Bra000377" - AT2G45180 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000377AT2G45180 (E=3e-041) | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (131 aa)    
Predicted Functional Partners:
Bra029563
AT4G05180 (E=6e-086) PSBQ, PSBQ-2, PSII-Q | PSBQ-2; calcium ion binding (226 aa)
           
  0.468
Bra013517
AT4G21280 (E=6e-075) PSBQ, PSBQA, PSBQ-1 | oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) (227 aa)
           
  0.468
Bra037299
AT2G16485 (E=0.0) | DNA binding / nucleic acid binding / protein binding / zinc ion binding (1869 aa)
           
  0.440
Bra037238
AT2G18090 (E=9e-162) | PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein (820 aa)
           
  0.440
Bra036836
AT3G51120 (E=0.0) | DNA binding / nucleic acid binding / protein binding / zinc ion binding (1275 aa)
           
  0.440
Bra012868
AT3G51120 (E=0.0) | DNA binding / nucleic acid binding / protein binding / zinc ion binding (1284 aa)
           
  0.440
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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