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Bra000397 protein (Brassica rapa) - STRING interaction network
"Bra000397" - AT2G45695 in Brassica rapa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra000397AT2G45695 (E=8e-040) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; CONTAINS InterPro DOMAIN/s- Ubiquitin related modifier 1 (InterPro-IPR015221), Ubiquitin-related modifier 1 (InterPro-IPR017188), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro-IPR016155); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G61113.1); Has 238 Blast hits to 238 proteins in 125 species- Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 72; Plants - 18; Viruses - 0; Other Eukaryo [...] (99 aa)    
Predicted Functional Partners:
Bra002930
AT5G55130 (E=3e-242) CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5); Mo-molybdopterin cofactor sulfurase ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thi [...] (466 aa)
       
  0.994
Bra035556
AT5G55130 (E=4e-240) CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5); Mo-molybdopterin cofactor sulfurase ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thi [...] (470 aa)
       
  0.994
Bra020036
AT5G19370 (E=2e-062) | rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein (301 aa)
       
  0.959
Bra015780
AT2G44270 (E=4e-120) | ATP binding ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (372 aa)
       
  0.855
Bra004822
AT2G44270 (E=3e-123) | ATP binding ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (399 aa)
       
  0.855
Bra011714
AT4G35910 (E=8e-211) | unknown protein ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (448 aa)
       
  0.852
Bra022403
AT1G76170 (E=9e-012) | ATP binding (133 aa)
       
  0.840
PrxII
AT1G65980 (E=3e-077) TPX1 | TPX1 (thioredoxin-dependent peroxidase 1); antioxidant/ oxidoreductase (162 aa)
       
  0.744
Bra038378
AT1G65980 (E=2e-065) TPX1 | TPX1 (thioredoxin-dependent peroxidase 1); antioxidant/ oxidoreductase (162 aa)
       
  0.744
Bra020782
AT3G06050 (E=8e-101) PRXIIF, ATPRXIIF | PRXIIF (PEROXIREDOXIN IIF); antioxidant/ peroxidase (201 aa)
       
  0.744
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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