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Bra000432 protein (Brassica rapa) - STRING interaction network
"Bra000432" - AT3G58810 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000432AT3G58810 (E=1e-127) MTPA2, ATMTPA2, MTP3, ATMTP3 | MTPA2 (METAL TOLERANCE PROTEIN A2); efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter (385 aa)    
Predicted Functional Partners:
Bra038842
AT2G19110 (E=0.0) HMA4 | HMA4; cadmium ion transmembrane transporter/ cadmium-transporting ATPase/ zinc ion transmembrane transporter (1271 aa)
   
   
  0.530
Bra024449
AT2G19110 (E=0.0) HMA4 | HMA4; cadmium ion transmembrane transporter/ cadmium-transporting ATPase/ zinc ion transmembrane transporter (1190 aa)
   
   
  0.530
Bra011164
AT4G30110 (E=0.0) HMA2 | HMA2; cadmium-transporting ATPase (872 aa)
   
   
  0.530
Bra014588
AT3G58060 (E=1e-198) | cation efflux family protein / metal tolerance protein, putative (MTPc3) (405 aa)
         
  0.496
Bra007377
AT3G58060 (E=2e-200) | cation efflux family protein / metal tolerance protein, putative (MTPc3) (410 aa)
         
  0.496
Bra003316
AT3G58060 (E=6e-194) | cation efflux family protein / metal tolerance protein, putative (MTPc3) (410 aa)
         
  0.496
Bra030434
AT1G51610 (E=6e-204) | cation efflux family protein / metal tolerance protein, putative (MTPc4) (453 aa)
         
  0.491
Bra018918
AT1G51610 (E=3e-203) | cation efflux family protein / metal tolerance protein, putative (MTPc4) (457 aa)
         
  0.491
Bra017167
AT1G51610 (E=2e-028) | cation efflux family protein / metal tolerance protein, putative (MTPc4) (101 aa)
         
  0.491
Bra017071
AT2G39450 (E=2e-189) MTP11, ATMTP11 | MTP11; cation transmembrane transporter/ manganese ion transmembrane transporter/ manganese-hydrogen antiporter (394 aa)
         
  0.484
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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