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Bra000461 protein (Brassica rapa) - STRING interaction network
"Bra000461" - AT4G22100 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000461AT4G22100 (E=1e-221) BGLU3 | BGLU3 (BETA GLUCOSIDASE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (685 aa)    
Predicted Functional Partners:
Bra026017
AT1G16900 (E=2e-290) | sugar binding / transferase, transferring glycosyl groups (569 aa)
       
  0.976
Bra016625
AT1G16900 (E=6e-286) | sugar binding / transferase, transferring glycosyl groups (570 aa)
       
  0.976
Bra033216
AT1G02145 (E=5e-046) | transferase, transferring glycosyl groups (258 aa)
       
  0.963
Bra032669
AT1G02145 (E=1e-230) | transferase, transferring glycosyl groups (604 aa)
       
  0.962
Bra005722
AT5G02410 (E=2e-227) | DIE2/ALG10 family (508 aa)
       
 
  0.950
Bra028183
AT5G38460 (E=7e-260) | ALG6, ALG8 glycosyltransferase family protein (513 aa)
       
 
  0.950
Bra005029
AT2G39630 (E=6e-155) | glycosyl transferase family 2 protein (414 aa)
       
 
  0.947
Bra000139
AT2G39630 (E=6e-168) | glycosyl transferase family 2 protein (336 aa)
       
 
  0.947
Bra013728
AT4G23740 (E=2e-277) | leucine-rich repeat transmembrane protein kinase, putative (935 aa)
     
  0.834
Bra038784
AT4G21150 (E=1e-139) HAP6 | HAP6 (HAPLESS 6); dolichyl-diphosphooligosaccharide-protein glycotransferase (760 aa)
       
  0.791
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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