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Bra000474 protein (Brassica rapa) - STRING interaction network
"Bra000474" - AT2G29450 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000474AT2G29450 (E=7e-115) ATGSTU5, ATGSTU1, AT103-1A | ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5); glutathione binding / glutathione transferase (224 aa)    
Predicted Functional Partners:
Bra004434
AT2G47730 (E=7e-090) ATGSTF8, ATGSTF5, GST6, GSTF8 | ATGSTF8 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8); glutathione binding / glutathione transferase (200 aa)
   
 
  0.797
Bra036259
AT2G02930 (E=6e-098) ATGSTF3, GST16 | ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3); glutathione transferase (213 aa)
   
 
  0.788
Bra000875
AT2G02930 (E=6e-103) ATGSTF3, GST16 | ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3); glutathione transferase (213 aa)
   
 
  0.786
Bra000460
AT2G47730 (E=1e-102) ATGSTF8, ATGSTF5, GST6, GSTF8 | ATGSTF8 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8); glutathione binding / glutathione transferase (215 aa)
   
 
  0.785
Bra036260
AT2G02930 (E=4e-104) ATGSTF3, GST16 | ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3); glutathione transferase (213 aa)
   
 
  0.780
Bra018543
AT2G02930 (E=9e-107) ATGSTF3, GST16 | ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3); glutathione transferase (213 aa)
   
 
  0.778
Bra031676
AT1G09640 (E=9e-204) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative (413 aa)
       
  0.761
Bra030790
AT1G57720 (E=6e-190) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative (566 aa)
       
  0.761
Bra020005
AT1G09640 (E=4e-193) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative (413 aa)
       
  0.761
GR1
AT3G24170 (E=3e-234) ATGR1 | ATGR1 (glutathione-disulfide reductase); FAD binding / NADP or NADPH binding / glutathione-disulfide reductase/ oxidoreductase ; Maintains high levels of reduced glutathione in the cytosol (486 aa)
       
  0.738
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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