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Bra000632 protein (Brassica rapa) - STRING interaction network
"Bra000632" - AT4G07390 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000632AT4G07390 (E=2e-116) | PQ-loop repeat family protein / transmembrane family protein (235 aa)    
Predicted Functional Partners:
Bra040733
AT4G06534 (E=9e-094) | unknown protein (467 aa)
           
  0.489
Bra025828
AT1G20575 (E=1e-086) | dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative (204 aa)
     
   
  0.479
Bra012235
AT1G20575 (E=6e-134) | dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative (247 aa)
     
   
  0.479
Bra037309
AT4G00030 (E=7e-088) | plastid-lipid associated protein PAP / fibrillin family protein (205 aa)
           
  0.478
Bra019378
AT4G22360 (E=7e-130) | SWIB complex BAF60b domain-containing protein (364 aa)
           
  0.478
Bra013468
AT4G20760 (E=9e-152) | short-chain dehydrogenase/reductase (SDR) family protein (296 aa)
           
  0.478
Bra039774
AT4G06744 (E=2e-189) | leucine-rich repeat family protein / extensin family protein (391 aa)
           
  0.473
Bra026234
AT4G06599 (E=6e-153) | ubiquitin family protein (337 aa)
           
  0.473
Bra026998
AT1G63110 (E=4e-212) | cell division cycle protein-related (477 aa)
     
   
  0.465
Bra031639
AT1G08720 (E=0.0) EDR1, ATEDR1 | EDR1 (ENHANCED DISEASE RESISTANCE 1); MAP kinase kinase kinase/ kinase/ protein serine/threonine/tyrosine kinase (1156 aa)
     
   
  0.456
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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