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Bra000663 protein (Brassica rapa) - STRING interaction network
"Bra000663" - AT4G09010 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000663AT4G09010 (E=8e-171) APX4 | APX4 (ASCORBATE PEROXIDASE 4); heme binding / peroxidase (348 aa)    
Predicted Functional Partners:
Bra023954
AT4G32320 (E=6e-079) APX6 | APX6; L-ascorbate peroxidase/ heme binding / peroxidase (306 aa)
     
 
  0.746
Bra015668
AT1G77490 (E=2e-182) TAPX | TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase (440 aa)
     
 
0.665
Bra037859
AT4G08390 (E=4e-147) SAPX | SAPX (STROMAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase (355 aa)
     
 
0.662
Bra017686
AT4G35000 (E=5e-144) APX3 | APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase (287 aa)
     
 
0.412
Bra018677
AT1G07890 (E=1e-117) APX1, CS1 | APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase (305 aa)
     
 
0.411
Bra031598
AT1G07890 (E=2e-120) APX1, CS1 | APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase (253 aa)
     
 
0.411
Bra034076
AT3G09640 (E=4e-131) APX2, APX1B | APX2 (ASCORBATE PEROXIDASE 2); L-ascorbate peroxidase (249 aa)
     
 
0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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