STRINGSTRING
Bra000711 protein (Brassica rapa) - STRING interaction network
"Bra000711" - AT4G10480 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000711AT4G10480 (E=5e-051) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative (208 aa)    
Predicted Functional Partners:
Bra031007
AT1G17880 (E=3e-052) | nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative (156 aa)
     
 
  0.998
Bra025940
AT1G17880 (E=8e-061) | nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative (166 aa)
     
 
  0.998
Bra016579
AT1G73230 (E=5e-056) | nascent polypeptide-associated complex (NAC) domain-containing protein (337 aa)
     
 
  0.998
Bra016010
AT1G73230 (E=2e-060) | nascent polypeptide-associated complex (NAC) domain-containing protein (166 aa)
     
 
  0.998
Bra008086
AT1G73230 (E=2e-059) | nascent polypeptide-associated complex (NAC) domain-containing protein (167 aa)
     
 
  0.998
Bra003851
AT1G73230 (E=7e-064) | nascent polypeptide-associated complex (NAC) domain-containing protein (164 aa)
     
 
  0.998
Bra001306
AT3G09500 (E=1e-059) | 60S ribosomal protein L35 (RPL35A) (123 aa)
     
   
  0.971
Bra031870
AT5G65220 (E=2e-023) | ribosomal protein L29 family protein (83 aa)
     
   
  0.971
Bra029771.1-P
AT3G09500 (E=1e-059) | 60S ribosomal protein L35 (RPL35A) (123 aa)
     
   
  0.971
Bra028867
AT5G02610 (E=3e-049) | 60S ribosomal protein L35 (RPL35D) (123 aa)
     
   
  0.971
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (7%) [ZH]