STRINGSTRING
Bra000739 protein (Brassica rapa) - STRING interaction network
"Bra000739" - AT4G11220 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000739AT4G11220 (E=4e-126) BTI2 | BTI2 (VIRB2-INTERACTING PROTEIN 2) (267 aa)    
Predicted Functional Partners:
Bra009166
AT5G06140 (E=2e-206) SNX1, ATSNX1 | SNX1 (SORTING NEXIN 1); phosphoinositide binding / protein binding (390 aa)
     
      0.825
Bra020367
AT5G58460 (E=0.0) ATCHX25, CHX25 | ATCHX25; monovalent cation-proton antiporter/ sodium-hydrogen antiporter (921 aa)
       
      0.822
Bra002651
AT5G58440 (E=1e-230) SNX2a | SNX2a (SORTING NEXIN 2a); phosphoinositide binding (556 aa)
       
      0.822
Bra022959
AT2G33870 (E=1e-112) ArRABA1h | ArRABA1h (Arabidopsis Rab GTPase homolog A1h); GTP binding (218 aa)
       
    0.650
Bra019285
AT4G23630 (E=2e-128) BTI1 | BTI1 (VIRB2-INTERACTING PROTEIN 1) (268 aa)
     
 
0.632
Bra013717
AT4G23630 (E=3e-129) BTI1 | BTI1 (VIRB2-INTERACTING PROTEIN 1) (276 aa)
     
 
0.632
Bra039807
AT3G53610 (E=2e-097) ATRAB8 | ATRAB8; GTP binding (215 aa)
       
 
  0.627
Bra003149
AT3G53610 (E=1e-102) ATRAB8 | ATRAB8; GTP binding (269 aa)
       
 
  0.627
Bra022032
AT5G46330 (E=2e-306) FLS2 | FLS2 (FLAGELLIN-SENSITIVE 2); ATP binding / kinase/ protein binding / protein serine/threonine kinase/ transmembrane receptor protein serine/threonine kinase (1107 aa)
       
  0.542
Bra036971
AT4G33905 (E=1e-087) | peroxisomal membrane protein 22 kDa, putative (270 aa)
     
 
  0.527
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (16%) [HD]