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Bra000752 protein (Brassica rapa) - STRING interaction network
"Bra000752" - AT4G11840 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000752AT4G11840 (E=2e-253) PLDGAMMA3 | PLDGAMMA3; phospholipase D (526 aa)    
Predicted Functional Partners:
Bra026899
AT1G13560 (E=2e-099) AAPT1, ATAAPT1 | AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups (382 aa)
         
  0.732
Bra026519
AT3G25585 (E=5e-160) AAPT2, ATAAPT2 | AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups (384 aa)
         
  0.732
Bra025147
AT3G25585 (E=3e-199) AAPT2, ATAAPT2 | AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups (385 aa)
         
  0.732
Bra019718
AT1G13560 (E=2e-165) AAPT1, ATAAPT1 | AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups (416 aa)
         
  0.732
Bra000374
AT2G45150 (E=4e-161) | phosphatidate cytidylyltransferase family protein (632 aa)
   
 
  0.728
Bra024851
AT2G01170 (E=1e-119) BAT1 | BAT1 (BIDIRECTIONAL AMINO ACID TRANSPORTER 1); amino acid transmembrane transporter (569 aa)
       
  0.706
Bra027001
AT1G63050 (E=6e-242) | membrane bound O-acyl transferase (MBOAT) family protein (467 aa)
         
  0.700
Bra019778
AT1G12640 (E=3e-244) | membrane bound O-acyl transferase (MBOAT) family protein (466 aa)
         
  0.700
Bra039179
AT3G02600 (E=2e-155) LPP3, ATLPP3 | LPP3 (LIPID PHOSPHATE PHOSPHATASE 3); phosphatidate phosphatase (354 aa)
         
  0.699
Bra026782
AT1G15080 (E=1e-151) ATPAP2, ATLPP2, LPP2 | LPP2 (LIPID PHOSPHATE PHOSPHATASE 2); acid phosphatase/ phosphatidate phosphatase (312 aa)
         
  0.699
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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