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Bra000820 protein (Brassica rapa) - STRING interaction network
"Bra000820" - AT4G03560 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Bra000820AT4G03560 (E=0.0) ATTPC1, TPC1, ATCCH1, FOU2 | ATTPC1 (TWO-PORE CHANNEL 1); calcium channel/ voltage-gated calcium channel (731 aa)    
Predicted Functional Partners:
Bra030437
AT1G51500 (E=0.0) CER5, D3, ABCG12, WBC12, ATWBC12 | CER5 (ECERIFERUM 5); ATPase, coupled to transmembrane movement of substances (692 aa)
       
      0.616
Bra031249
AT3G21090 (E=0.0) | ABC transporter family protein (691 aa)
       
      0.546
Bra007319
AT3G57330 (E=0.0) ACA11 | ACA11 (autoinhibited Ca2+-ATPase 11); calcium-transporting ATPase/ calmodulin binding ; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1021 aa)
     
   
  0.427
Bra003276
AT3G57330 (E=0.0) ACA11 | ACA11 (autoinhibited Ca2+-ATPase 11); calcium-transporting ATPase/ calmodulin binding ; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1025 aa)
     
   
  0.427
Bra028967
AT5G55630 (E=8e-150) KCO1, TPK1, ATKCO1, ATTPK1 | ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel (363 aa)
           
  0.414
Bra010917
AT1G27770 (E=0.0) ACA1, PEA1 | ACA1 (AUTO-INHIBITED CA2+-ATPASE 1); calcium channel/ calcium-transporting ATPase/ calmodulin binding ; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1017 aa)
     
   
  0.404
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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