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Bra000864 protein (Brassica rapa) - STRING interaction network
"Bra000864" - AT4G02780 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000864AT4G02780 (E=0.0) GA1, ABC33, ATCPS1 | GA1 (GA REQUIRING 1); ent-copalyl diphosphate synthase/ magnesium ion binding (898 aa)    
Predicted Functional Partners:
Bra035120
AT1G79460 (E=0.0) GA2, KS, ATKS | GA2 (GA REQUIRING 2); ent-kaurene synthase (780 aa)
     
 
0.604
Bra039762
AT1G66350 (E=6e-231) RGL1, RGL | RGL1 (RGA-LIKE 1); transcription factor (488 aa)
           
  0.472
Bra013776
AT4G24210 (E=5e-057) SLY1 | SLY1 (SLEEPY1) (146 aa)
           
  0.436
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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