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Bra000897 protein (Brassica rapa) - STRING interaction network
"Bra000897" - AT4G02060 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000897AT4G02060 (E=0.0) PRL, MCM7 | PRL (PROLIFERA); ATP binding / DNA binding / DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide binding (718 aa)    
Predicted Functional Partners:
Bra033756
AT5G44635 (E=0.0) MCM6 | minichromosome maintenance family protein / MCM family protein (825 aa)
   
0.999
Bra013169
AT2G07690 (E=0.0) MCM5 | minichromosome maintenance family protein / MCM family protein (727 aa)
   
0.999
Bra013068
AT2G16440 (E=0.0) MCM4 | DNA replication licensing factor, putative (825 aa)
   
0.999
Bra022027
AT5G46280 (E=0.0) MCM3 | DNA replication licensing factor, putative (776 aa)
   
0.999
Bra025026
AT5G46280 (E=0.0) MCM3 | DNA replication licensing factor, putative (771 aa)
   
0.999
Bra014033
AT1G44900 (E=0.0) MCM2 | ATP binding / DNA binding / DNA-dependent ATPase (927 aa)
     
0.998
Bra040301
AT1G44900 (E=0.0) MCM2 | ATP binding / DNA binding / DNA-dependent ATPase (931 aa)
     
0.998
Bra039520
AT5G44635 (E=3e-112) MCM6 | minichromosome maintenance family protein / MCM family protein (404 aa)
   
0.998
Bra029782
AT3G09660 (E=3e-287) MCM8 | MCM8; ATP binding / DNA binding / DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide binding (799 aa)
   
0.998
Bra013131
AT2G14050 (E=0.0) MCM9 | MCM9; ATP binding / DNA binding / DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide binding (658 aa)
     
0.998
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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