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Bra000986 protein (Brassica rapa) - STRING interaction network
"Bra000986" - AT3G01820 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000986AT3G01820 (E=3e-097) | adenylate kinase family protein (263 aa)    
Predicted Functional Partners:
Bra034087
AT3G09820 (E=3e-185) ADK1, ATADK1 | ADK1 (adenosine kinase 1); adenosine kinase/ copper ion binding (344 aa)
   
 
  0.949
Bra009536
AT5G03300 (E=8e-187) ADK2 | ADK2 (ADENOSINE KINASE 2); adenosine kinase/ copper ion binding / kinase (344 aa)
   
 
  0.949
Bra005735
AT5G03300 (E=2e-188) ADK2 | ADK2 (ADENOSINE KINASE 2); adenosine kinase/ copper ion binding / kinase (345 aa)
   
 
  0.949
Bra038621
AT5G63310 (E=5e-108) NDPK2, NDPK1A, NDPK IA IA, NDPK IA, ATNDPK2 | NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2); ATP binding / nucleoside diphosphate kinase/ protein binding (232 aa)
   
  0.947
Bra035260
AT4G11010 (E=5e-104) NDPK3 | NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3); ATP binding / nucleoside diphosphate kinase (236 aa)
   
  0.947
Bra033163
AT4G11010 (E=5e-111) NDPK3 | NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3); ATP binding / nucleoside diphosphate kinase (235 aa)
   
  0.947
Bra030844
AT4G09320 (E=1e-076) NDPK1 | NDPK1; ATP binding / nucleoside diphosphate kinase (148 aa)
   
  0.947
Bra027579
AT4G09320 (E=1e-076) NDPK1 | NDPK1; ATP binding / nucleoside diphosphate kinase (148 aa)
   
  0.947
Bra016603
AT1G17400 (E=6e-086) | unknown protein (436 aa)
   
  0.947
Bra013742
AT4G23900 (E=2e-114) | nucleoside diphosphate kinase 4 (NDK4) (237 aa)
   
  0.947
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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