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Bra001094 protein (Brassica rapa) - STRING interaction network
"Bra001094" - AT3G03960 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001094AT3G03960 (E=2e-288) | chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (548 aa)    
Predicted Functional Partners:
Bra006584
AT5G20890 (E=2e-288) | chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (748 aa)
     
0.999
Bra000254
AT3G18190 (E=4e-018) | chaperonin, putative (240 aa)
     
  0.999
Bra008652
AT3G02530 (E=1e-298) | chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (536 aa)
   
0.999
Bra040591
AT3G02530 (E=3e-302) | chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (535 aa)
   
0.998
Bra040242
AT5G26360 (E=6e-310) | chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (555 aa)
   
0.998
Bra001174
AT5G26360 (E=5e-311) | chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (555 aa)
   
0.998
Bra012506
AT1G24510 (E=7e-305) | T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (535 aa)
   
0.998
Bra010965
AT1G24510 (E=2e-304) | T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (535 aa)
   
0.998
Bra022292
AT3G18190 (E=4e-274) | chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (533 aa)
   
0.998
Bra021300
AT3G18190 (E=3e-283) | chaperonin, putative ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (531 aa)
     
0.998
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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