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Bra001124 protein (Brassica rapa) - STRING interaction network
"Bra001124" - AT3G04810 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001124AT3G04810 (E=4e-181) ATNEK2 | ATNEK2 (NIMA-RELATED KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (585 aa)    
Predicted Functional Partners:
Bra031135
AT2G20635 (E=6e-112) | ATP binding / protein kinase/ protein serine/threonine kinase (475 aa)
     
 
  0.621
Bra013534
AT4G21530 (E=0.0) | nucleotide binding (773 aa)
     
 
    0.610
Bra031315
AT3G21870 (E=2e-089) CYCP2;1 | CYCP2;1 (cyclin p2;1); cyclin-dependent protein kinase (210 aa)
           
  0.606
Bra035000
AT3G44200 (E=3e-304) ATNEK6, NEK6, IBO1 | NEK6 ("NIMA (NEVER IN MITOSIS, GENE A)-RELATED 6"); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (911 aa)
       
0.570
Bra006205
AT5G13530 (E=0.0) KEG | KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase (1608 aa)
       
 
  0.551
Bra010196
AT1G33410 (E=0.0) SAR1, NUP160, ATNUP160 | SAR1 (suppressor of auxin resistance1) (1927 aa)
     
 
    0.531
Bra010000
AT2G38670 (E=7e-052) PECT1 | PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate cytidylyltransferase (535 aa)
           
  0.493
Bra040822
AT2G20050 (E=0.0) | ATP binding / cAMP-dependent protein kinase regulator/ catalytic/ protein kinase/ protein serine/threonine phosphatase (966 aa)
     
   
  0.492
Bra032991
AT3G27240 (E=1e-144) | cytochrome c1, putative (307 aa)
           
  0.477
Bra037549
AT5G01820 (E=5e-013) ATSR1, SnRK3.15, CIPK14, ATCIPK14 | ATSR1 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (91 aa)
           
  0.467
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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