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Bra001151 protein (Brassica rapa) - STRING interaction network
"Bra001151" - AT3G05520 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001151AT3G05520 (E=3e-157) | F-actin capping protein alpha subunit family protein ; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (308 aa)    
Predicted Functional Partners:
Bra016116
AT1G71790 (E=6e-138) | F-actin capping protein beta subunit family protein (256 aa)
     
  0.993
Bra023140
AT1G30825 (E=5e-148) ARPC2A, DIS2 | DIS2 (DISTORTED TRICHOMES 2); structural molecule (320 aa)
     
      0.940
Bra014893
AT1G30825 (E=1e-146) ARPC2A, DIS2 | DIS2 (DISTORTED TRICHOMES 2); structural molecule (318 aa)
     
      0.940
Bra005500
AT2G33385 (E=5e-065) arpc2b | arpc2b (actin-related protein C2B); structural molecule (319 aa)
     
      0.940
Bra039097
AT3G27000 (E=3e-229) ARP2, ATARP2, WRM | ARP2 (ACTIN RELATED PROTEIN 2); protein binding / structural constituent of cytoskeleton (389 aa)
     
      0.935
Bra025243
AT3G27000 (E=5e-115) ARP2, ATARP2, WRM | ARP2 (ACTIN RELATED PROTEIN 2); protein binding / structural constituent of cytoskeleton (366 aa)
     
      0.935
Bra036665
AT2G04750 (E=0.0) | fimbrin-like protein, putative (661 aa)
     
 
  0.914
Bra036170
AT5G48460 (E=0.0) | fimbrin-like protein, putative (652 aa)
     
 
  0.914
Bra035526
AT5G35700 (E=0.0) FIM2 | FIM2 (FIMBRIN-LIKE PROTEIN 2); actin binding (696 aa)
     
 
  0.914
Bra035388
AT5G35700 (E=0.0) FIM2 | FIM2 (FIMBRIN-LIKE PROTEIN 2); actin binding (686 aa)
     
 
  0.914
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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