STRINGSTRING
Bra001212 protein (Brassica rapa) - STRING interaction network
"Bra001212" - AT3G06670 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001212AT3G06670 (E=0.0) | binding (913 aa)    
Predicted Functional Partners:
Bra026408
AT4G26700 (E=0.0) ATFIM1, FIM1 | ATFIM1; actin binding (1230 aa)
       
  0.836
Bra019089
AT4G26720 (E=6e-177) PPX1, PPX-1 | PPX1 (PROTEIN PHOSPHATASE X 1); protein serine/threonine phosphatase (305 aa)
       
  0.836
Bra031712
AT1G10430 (E=8e-172) PP2A-2 | PP2A-2; protein serine/threonine phosphatase (306 aa)
       
  0.819
Bra027833
AT1G59830 (E=9e-181) PP2A-1 | PP2A-1; protein serine/threonine phosphatase (306 aa)
       
  0.819
Bra019934
AT1G10430 (E=2e-180) PP2A-2 | PP2A-2; protein serine/threonine phosphatase (306 aa)
       
  0.819
Bra017398
AT1G10430 (E=2e-038) PP2A-2 | PP2A-2; protein serine/threonine phosphatase (132 aa)
       
  0.819
Bra016870
AT2G42500 (E=6e-186) PP2A-4 | PP2A-4; hydrolase/ protein serine/threonine phosphatase (313 aa)
       
  0.819
Bra016247
AT1G69960 (E=9e-179) PP2A | PP2A (SERINE/THREONINE PROTEIN PHOSPHATASE 2A); protein serine/threonine phosphatase (306 aa)
       
  0.819
Bra007398
AT3G58500 (E=3e-188) PP2A-3, EP7 | PP2A-3 (PROTEIN PHOSPHATASE 2A-3); protein serine/threonine phosphatase (313 aa)
       
  0.819
Bra012727
AT1G10430 (E=2e-014) PP2A-2 | PP2A-2; protein serine/threonine phosphatase (106 aa)
       
  0.819
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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