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Bra001221 protein (Brassica rapa) - STRING interaction network
"Bra001221" - AT3G06860 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001221AT3G06860 (E=0.0) MFP2, ATMFP2 | MFP2 (MULTIFUNCTIONAL PROTEIN 2); 3-hydroxyacyl-CoA dehydrogenase/ enoyl-CoA hydratase (725 aa)    
Predicted Functional Partners:
Bra005522
AT2G33150 (E=2e-228) PKT3, PED1, KAT2 | PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3); acetyl-CoA C-acyltransferase (462 aa)
 
  0.999
Bra022927
AT2G33150 (E=9e-232) PKT3, PED1, KAT2 | PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3); acetyl-CoA C-acyltransferase (460 aa)
 
  0.999
Bra037501
AT5G48230 (E=3e-211) EMB1276, ACAT2 | ACAT2 (ACETOACETYL-COA THIOLASE 2); acetyl-CoA C-acetyltransferase/ catalytic (425 aa)
 
  0.999
Bra020710
AT5G48230 (E=1e-207) EMB1276, ACAT2 | ACAT2 (ACETOACETYL-COA THIOLASE 2); acetyl-CoA C-acetyltransferase/ catalytic (403 aa)
 
  0.999
Bra017469
AT5G47720 (E=9e-210) | acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative (432 aa)
   
  0.999
Bra020673
AT5G48880 (E=6e-215) PKT2, KAT5 | PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase/ catalytic (456 aa)
 
  0.999
Bra036182
AT5G48230 (E=1e-188) EMB1276, ACAT2 | ACAT2 (ACETOACETYL-COA THIOLASE 2); acetyl-CoA C-acetyltransferase/ catalytic (431 aa)
   
  0.999
Bra030586
AT1G04710 (E=8e-193) KAT1, PKT4 | PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4); acetyl-CoA C-acyltransferase/ catalytic (451 aa)
 
  0.999
Bra022152
AT5G47720 (E=6e-014) | acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative (126 aa)
   
  0.999
Bra021829
AT2G33150 (E=7e-227) PKT3, PED1, KAT2 | PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3); acetyl-CoA C-acyltransferase (462 aa)
 
  0.999
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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