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Bra001277 protein (Brassica rapa) - STRING interaction network
"Bra001277" - AT3G07940 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
Bra001277AT3G07940 (E=1e-188) | zinc finger and C2 domain protein, putative (384 aa)    
Predicted Functional Partners:
Bra026910
AT2G37550 (E=1e-058) ASP1, AGD7 | AGD7; ARF GTPase activator/ DNA binding / zinc ion binding (181 aa)
     
  0.795
Bra014626
AT2G48020 (E=6e-036) | sugar transporter, putative (141 aa)
       
  0.727
Bra034627
AT4G34450 (E=9e-301) | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (902 aa)
     
  0.695
Bra011535
AT4G34450 (E=0.0) | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (886 aa)
     
  0.695
Bra001970
AT4G34450 (E=0.0) | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (887 aa)
     
  0.695
Bra039812
AT3G53710 (E=4e-195) AGD6 | AGD6; ARF GTPase activator/ DNA binding / zinc ion binding (451 aa)
     
0.680
Bra000005
AT2G37550 (E=2e-159) ASP1, AGD7 | AGD7; ARF GTPase activator/ DNA binding / zinc ion binding (477 aa)
     
0.680
Bra017179
AT2G37550 (E=2e-141) ASP1, AGD7 | AGD7; ARF GTPase activator/ DNA binding / zinc ion binding (441 aa)
     
0.680
Bra007020
AT3G53710 (E=7e-178) AGD6 | AGD6; ARF GTPase activator/ DNA binding / zinc ion binding (454 aa)
     
0.680
Bra005187
AT3G53710 (E=2e-131) AGD6 | AGD6; ARF GTPase activator/ DNA binding / zinc ion binding (441 aa)
     
0.679
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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