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Bra001280 protein (Brassica rapa) - STRING interaction network
"Bra001280" - AT3G13530 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001280AT3G13530 (E=0.0) MAPKKK7, MAP3KE1 | MAPKKK7; ATP binding / binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase (1303 aa)    
Predicted Functional Partners:
Bra000209
AT2G40860 (E=0.0) | protein kinase family protein / protein phosphatase 2C ( PP2C) family protein (655 aa)
     
0.949
Bra037076
AT3G47090 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (1011 aa)
     
  0.947
Bra018165
AT3G47090 (E=6e-100) | leucine-rich repeat transmembrane protein kinase, putative (748 aa)
     
  0.947
Bra018164
AT3G47110 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (1022 aa)
     
  0.947
Bra015829
AT1G75640 (E=0.0) | leucine-rich repeat family protein / protein kinase family protein (1138 aa)
     
  0.947
Bra006560
AT5G20480 (E=0.0) EFR | EFR (EF-TU RECEPTOR); ATP binding / kinase/ protein serine/threonine kinase (1032 aa)
     
  0.947
Bra005563
AT3G47570 (E=8e-282) | leucine-rich repeat transmembrane protein kinase, putative (963 aa)
     
  0.947
Bra005562
AT3G47570 (E=6e-309) | leucine-rich repeat transmembrane protein kinase, putative (1026 aa)
     
  0.947
Bra036791
AT3G51560 (E=0.0) | ATP binding / protein binding / transmembrane receptor (1994 aa)
     
0.921
Bra011668
AT4G36180 (E=0.0) | leucine-rich repeat family protein (1125 aa)
     
0.921
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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