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Bra001367 protein (Brassica rapa) - STRING interaction network
"Bra001367" - AT3G10525 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Textmining
[Homology]
Score
Bra001367AT3G10525 (E=4e-031) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- SIM (SIAMESE); cyclin-dependent protein kinase inhibitor (TAIR-AT5G04470.1); Has 23 Blast hits to 23 proteins in 6 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 4 (source- NCBI BLink). (123 aa)    
Predicted Functional Partners:
Bra034614
AT2G27960 (E=4e-040) CKS1, CKS1AT | CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1); cyclin-dependent protein kinase/ protein binding ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (88 aa)
       
      0.868
Bra034380
AT2G27970 (E=2e-037) CKS2 | CKS2 (CDK-subunit 2); cyclin-dependent protein kinase/ cyclin-dependent protein kinase regulator ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (81 aa)
       
      0.868
Bra040708
AT3G02065 (E=8e-221) | DEAD/DEAH box helicase family protein (502 aa)
       
      0.516
Bra040699
AT3G01540 (E=2e-242) DRH1, ATDRH1 | DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase (609 aa)
       
      0.516
Bra038370
AT4G09730 (E=5e-076) | DEAD/DEAH box helicase, putative (361 aa)
       
      0.516
Bra036582
AT5G26742 (E=0.0) emb1138 | emb1138 (embryo defective 1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/ nucleic acid binding / zinc ion binding (743 aa)
       
      0.516
Bra035903
AT5G62190 (E=2e-177) PRH75 | PRH75; ATP-dependent helicase/ DEAD/H-box RNA helicase binding (633 aa)
       
      0.516
Bra035857
AT5G63120 (E=2e-278) | ethylene-responsive DEAD box RNA helicase, putative (RH30) (591 aa)
       
      0.516
Bra035518
AT1G31970 (E=3e-229) STRS1 | STRS1 (STRESS RESPONSE SUPPRESSOR 1); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding (536 aa)
       
      0.516
Bra031349
AT3G22310 (E=1e-217) PMH1, ATRH9 | PMH1 (PUTATIVE MITOCHONDRIAL RNA HELICASE 1); ATP-dependent helicase/ DNA binding / RNA binding (602 aa)
       
      0.516
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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