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Bra001401 protein (Brassica rapa) - STRING interaction network
"Bra001401" - AT3G11400 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra001401AT3G11400 (E=5e-142) EIF3G1, ATEIF3G1 | eukaryotic translation initiation factor 3G / eIF3g ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA (294 aa)    
Predicted Functional Partners:
Bra033735
AT5G44320 (E=7e-275) | eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (581 aa)
     
  0.995
Bra039505
AT5G44320 (E=6e-032) | eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative (107 aa)
     
  0.995
Bra027543
AT5G44320 (E=2e-273) | eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (585 aa)
     
  0.995
Bra039579
AT1G36730 (E=4e-177) | eukaryotic translation initiation factor 5, putative / eIF-5, putative (447 aa)
     
  0.995
Bra003666
AT1G77840 (E=1e-112) | eukaryotic translation initiation factor 5, putative / eIF-5, putative (417 aa)
     
  0.995
Bra033012
AT2G46280 (E=2e-170) TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (637 aa)
     
  0.994
Bra025277
AT2G46280 (E=2e-110) TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (344 aa)
     
  0.994
Bra014363
AT1G54290 (E=8e-052) | eukaryotic translation initiation factor SUI1, putative (115 aa)
     
  0.993
Bra026376
AT4G27130 (E=2e-060) | eukaryotic translation initiation factor SUI1, putative (113 aa)
     
  0.993
Bra014363.1-P
AT1G54290 (E=8e-052) | eukaryotic translation initiation factor SUI1, putative (115 aa)
     
  0.993
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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