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Bra001499 protein (Brassica rapa) - STRING interaction network
"Bra001499" - AT3G13320 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001499AT3G13320 (E=3e-215) CAX2, atcax2 | CAX2 (CATION EXCHANGER 2); calcium-cation antiporter/ calcium-hydrogen antiporter (497 aa)    
Predicted Functional Partners:
Bra028046
AT1G34260 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1442 aa)
       
      0.576
Bra021545
AT3G14270 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1774 aa)
       
      0.576
Bra016167
AT1G71010 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1541 aa)
       
      0.576
Bra011429
AT4G33240 (E=0.0) | 1-phosphatidylinositol-4-phosphate 5-kinase/ ATP binding / phosphatidylinositol phosphate kinase/ protein binding / zinc ion binding (1719 aa)
       
      0.576
Bra007954
AT1G71010 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1539 aa)
       
      0.576
Bra001545
AT3G14270 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1767 aa)
       
      0.576
Bra031650
AT1G08960 (E=2e-071) CAX11, ATCAX11 | CAX11; calcium-sodium antiporter/ cation-cation antiporter (182 aa)
     
   
  0.554
Bra004443
AT2G47600 (E=5e-284) ATMHX, MHX1, ATMHX1 | ATMHX (ARABIDOPSIS THALIANA MAGNESIUM/PROTON EXCHANGER); calcium-sodium antiporter/ cation-cation antiporter (537 aa)
           
  0.544
Bra040256
AT3G21180 (E=5e-023) ACA9, ATACA9 | ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9); calcium-transporting ATPase/ calmodulin binding (80 aa)
       
 
  0.539
Bra039940
AT2G22950 (E=0.0) | calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7) ; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1014 aa)
       
 
  0.539
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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