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Bra001517 protein (Brassica rapa) - STRING interaction network
"Bra001517" - AT2G15900 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001517AT2G15900 (E=2e-056) | phox (PX) domain-containing protein (424 aa)    
Predicted Functional Partners:
Bra034125
AT3G10540 (E=2e-256) | 3-phosphoinositide-dependent protein kinase, putative (489 aa)
       
  0.574
Bra029850
AT3G10540 (E=4e-251) | 3-phosphoinositide-dependent protein kinase, putative (481 aa)
       
  0.574
Bra009447
AT5G04510 (E=1e-247) PDK1, ATPDK1 | PDK1 (3’-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); 3-phosphoinositide-dependent protein kinase/ kinase/ phosphoinositide binding / protein binding / protein kinase (490 aa)
       
  0.574
Bra040057
AT3G08730 (E=3e-230) ATPK1, ATPK6, ATS6K1, PK6, PK1, S6K1 | PK1 (PROTEIN-SERINE KINASE 1); kinase/ protein binding / protein kinase/ protein serine/threonine kinase (460 aa)
     
 
  0.541
Bra040056
AT3G08730 (E=7e-118) ATPK1, ATPK6, ATS6K1, PK6, PK1, S6K1 | PK1 (PROTEIN-SERINE KINASE 1); kinase/ protein binding / protein kinase/ protein serine/threonine kinase (407 aa)
     
 
  0.541
Bra029713
AT3G08730 (E=2e-232) ATPK1, ATPK6, ATS6K1, PK6, PK1, S6K1 | PK1 (PROTEIN-SERINE KINASE 1); kinase/ protein binding / protein kinase/ protein serine/threonine kinase (461 aa)
     
 
  0.541
Bra029712
AT3G08720 (E=1e-174) ATPK19, ATS6K2, S6K2, ATPK2 | S6K2 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2); kinase/ protein kinase (452 aa)
     
 
  0.541
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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