STRINGSTRING
GRF5 protein (Brassica rapa) - STRING interaction network
"GRF5" - AT3G13960 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRF5AT3G13960 (E=4e-066) AtGRF5 | AtGRF5 (GROWTH-REGULATING FACTOR 5); transcription activator (363 aa)    
Predicted Functional Partners:
Bra036131
AT5G28640 (E=2e-050) AN3, GIF, GIF1 | AN3 (ANGUSTIFOLIA 3); protein binding / transcription coactivator (203 aa)
       
 
  0.644
Bra020616
AT5G28640 (E=8e-038) AN3, GIF, GIF1 | AN3 (ANGUSTIFOLIA 3); protein binding / transcription coactivator (204 aa)
       
 
  0.644
Bra010002
AT5G28640 (E=7e-050) AN3, GIF, GIF1 | AN3 (ANGUSTIFOLIA 3); protein binding / transcription coactivator (203 aa)
       
 
  0.644
Bra033281
AT4G00850 (E=8e-033) GIF3 | GIF3 (GRF1-INTERACTING FACTOR 3); protein binding / transcription coactivator (206 aa)
       
 
  0.499
Bra032623
AT1G01160 (E=5e-042) GIF2 | SSXT protein-related / transcription co-activator-related (203 aa)
       
 
  0.499
Bra033615
AT4G39400 (E=0.0) BRI1, CBB2, DWF2, BIN1, ATBRI1 | BRI1 (BRASSINOSTEROID INSENSITIVE 1); kinase/ protein binding / protein heterodimerization/ protein homodimerization/ protein kinase/ protein serine/threonine kinase (1194 aa)
           
  0.475
Bra011862
AT4G39400 (E=0.0) BRI1, CBB2, DWF2, BIN1, ATBRI1 | BRI1 (BRASSINOSTEROID INSENSITIVE 1); kinase/ protein binding / protein heterodimerization/ protein homodimerization/ protein kinase/ protein serine/threonine kinase (1194 aa)
           
  0.475
Bra010684
AT4G39400 (E=0.0) BRI1, CBB2, DWF2, BIN1, ATBRI1 | BRI1 (BRASSINOSTEROID INSENSITIVE 1); kinase/ protein binding / protein heterodimerization/ protein homodimerization/ protein kinase/ protein serine/threonine kinase (1174 aa)
           
  0.475
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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