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Bra001546 protein (Brassica rapa) - STRING interaction network
"Bra001546" - AT1G53840 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra001546AT1G53840 (E=6e-213) ATPME1 | ATPME1; pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (589 aa)    
Predicted Functional Partners:
Bra000327
AT1G43080 (E=2e-163) | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (474 aa)
       
  0.699
Bra030619
AT1G05660 (E=2e-196) | polygalacturonase, putative / pectinase, putative (398 aa)
       
  0.698
Bra027211
AT3G15720 (E=2e-197) | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (451 aa)
       
  0.698
Bra027210
AT3G15720 (E=1e-206) | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (456 aa)
       
  0.698
Bra023600
AT5G17200 (E=2e-170) | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (428 aa)
       
  0.698
Bra015446
AT1G05650 (E=4e-184) | polygalacturonase, putative / pectinase, putative (394 aa)
       
  0.698
Bra011341
AT4G32375 (E=1e-124) | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (393 aa)
       
  0.698
Bra001605
AT3G15720 (E=6e-215) | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (452 aa)
       
  0.698
Bra035588
AT5G55720 (E=9e-198) | pectate lyase family protein (388 aa)
       
  0.650
Bra029773
AT3G09540 (E=5e-170) | pectate lyase family protein (331 aa)
       
  0.650
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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