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Bra001588 protein (Brassica rapa) - STRING interaction network
"Bra001588" - AT3G15210 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001588AT3G15210 (E=6e-068) ATERF-4, ERF4, RAP2.5, ATERF4 | ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4); DNA binding / protein binding / transcription factor/ transcription repressor (211 aa)    
Predicted Functional Partners:
Bra006489
AT5G19000 (E=3e-177) ATBPM1 | ATBPM1 (BTB-POZ and MATH domain 1); protein binding (403 aa)
       
      0.612
Bra002200
AT5G19000 (E=2e-197) ATBPM1 | ATBPM1 (BTB-POZ and MATH domain 1); protein binding (400 aa)
       
      0.612
Bra037748
AT5G63610 (E=1e-234) HEN3, CDKE;1, ATCDK8 | CDKE;1 (CYCLIN-DEPENDENT KINASE E;1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (468 aa)
       
      0.509
Bra011001
AT1G25540 (E=3e-301) PFT1 | PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator (832 aa)
       
      0.509
Bra004926
AT2G45640 (E=4e-059) SAP18, ATSAP18 | SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18); protein binding / transcription regulator (152 aa)
       
 
  0.499
Bra004160
AT1G66340 (E=0.0) ETR1, EIN1, ETR | ETR1 (ETHYLENE RESPONSE 1); ethylene binding / protein histidine kinase/ two-component response regulator (736 aa)
           
  0.416
Bra017809
AT4G36920 (E=4e-204) AP2, FLO2, FL1 | AP2 (APETALA 2); transcription factor (432 aa)
           
  0.414
Bra011741
AT4G36920 (E=4e-204) AP2, FLO2, FL1 | AP2 (APETALA 2); transcription factor (433 aa)
           
  0.414
Bra024737
AT1G25540 (E=0.0) PFT1 | PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator (902 aa)
       
      0.414
Bra002367
AT5G21222 (E=0.0) | protein kinase family protein (838 aa)
           
  0.405
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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