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Bra001629 protein (Brassica rapa) - STRING interaction network
"Bra001629" - AT3G16360 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001629AT3G16360 (E=9e-045) AHP4 | AHP4 (HPT PHOSPHOTRANSMITTER 4); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups (136 aa)    
Predicted Functional Partners:
Bra036579
AT5G26594 (E=9e-063) ARR24 | ARR24 (Arabidopsis response regulator 24); two-component response regulator (134 aa)
       
  0.975
Bra001099
AT3G04280 (E=1e-051) ARR22 | ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator (143 aa)
       
  0.975
Bra040206
AT3G04280 (E=2e-020) ARR22 | ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator (179 aa)
       
  0.967
Bra040204
AT3G04280 (E=1e-053) ARR22 | ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator (136 aa)
       
  0.967
Bra040134
AT3G04580 (E=0.0) EIN4 | EIN4 (ETHYLENE INSENSITIVE 4); ethylene binding / glycogen synthase kinase 3/ protein histidine kinase/ receptor (766 aa)
       
  0.967
Bra035381
AT5G35750 (E=0.0) AHK2 | AHK2 (ARABIDOPSIS HISTIDINE KINASE 2); cytokinin receptor/ osmosensor/ protein histidine kinase (1149 aa)
       
  0.967
Bra034589
AT1G27320 (E=2e-025) AHK3 | AHK3 (ARABIDOPSIS HISTIDINE KINASE 3); cytokinin receptor/ osmosensor/ protein histidine kinase (243 aa)
       
  0.967
Bra032819
AT1G27350 (E=6e-032) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; CONTAINS InterPro DOMAIN/s- Ribosome associated membrane RAMP4 (InterPro-IPR010580); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G27330.1); Has 267 Blast hits to 267 proteins in 83 species- Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 29 (source- NCBI BLink). (135 aa)
       
  0.967
Bra032761
AT2G47430 (E=5e-306) CKI1 | CKI1 (CYTOKININ-INDEPENDENT 1); protein histidine kinase/ two-component response regulator (1039 aa)
       
  0.967
Bra030037
AT1G27320 (E=0.0) AHK3 | AHK3 (ARABIDOPSIS HISTIDINE KINASE 3); cytokinin receptor/ osmosensor/ protein histidine kinase (1017 aa)
       
  0.967
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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