STRINGSTRING
Bra001636 protein (Brassica rapa) - STRING interaction network
"Bra001636" - AT3G16570 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001636AT3G16570 (E=4e-051) RALFL23 | RALFL23 (ralf-like 23); signal transducer (133 aa)    
Predicted Functional Partners:
Bra028825
AT5G03620 (E=0.0) | subtilase family protein (1091 aa)
           
  0.477
Bra023297
AT1G32940 (E=0.0) ATSBT3.5, SBT3.5 | SBT3.5; identical protein binding / serine-type endopeptidase (1507 aa)
           
  0.418
Bra012744
AT4G16100 (E=5e-050) | unknown protein (330 aa)
           
  0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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