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Bra001638 protein (Brassica rapa) - STRING interaction network
"Bra001638" - AT3G16690 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001638AT3G16690 (E=6e-101) | nodulin MtN3 family protein (231 aa)    
Predicted Functional Partners:
Bra031789
AT2G32560 (E=2e-160) | F-box family protein (374 aa)
           
  0.487
Bra019726
AT2G32560 (E=1e-142) | F-box family protein (317 aa)
           
  0.473
Bra039019
AT2G19770 (E=1e-063) PRF5 | PRF5 (PROFILIN5); actin binding / actin monomer binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (134 aa)
           
  0.404
Bra039018
AT2G19760 (E=1e-066) PFN1, PRF1 | PRF1 (PROFILIN 1); actin binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (131 aa)
           
  0.404
Bra036707
AT2G19760 (E=1e-066) PFN1, PRF1 | PRF1 (PROFILIN 1); actin binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (131 aa)
           
  0.404
Bra036705
AT2G19770 (E=1e-063) PRF5 | PRF5 (PROFILIN5); actin binding / actin monomer binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (134 aa)
           
  0.404
Bra031101
AT2G19770 (E=1e-061) PRF5 | PRF5 (PROFILIN5); actin binding / actin monomer binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (134 aa)
           
  0.404
Bra031097
AT2G19760 (E=2e-066) PFN1, PRF1 | PRF1 (PROFILIN 1); actin binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (131 aa)
           
  0.404
Bra024148
AT4G29340 (E=6e-064) PRF4 | PRF4 (PROFILIN 4); actin binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (134 aa)
           
  0.404
Bra014545
AT5G56600 (E=1e-019) PFN3, PRF3 | PRF3 (PROFILIN 3); actin binding (205 aa)
           
  0.404
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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