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Bra001727 protein (Brassica rapa) - STRING interaction network
"Bra001727" - AT3G18940 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
Bra001727AT3G18940 (E=3e-149) | clast3-related ; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1 (282 aa)    
Predicted Functional Partners:
Bra040713
AT1G47250 (E=1e-015) PAF2 | PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase (132 aa)
     
 
  0.933
Bra035332
AT5G42790 (E=6e-131) PAF1, ATPSM30 | PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase (271 aa)
     
 
  0.933
Bra027456
AT5G42790 (E=2e-131) PAF1, ATPSM30 | PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase (275 aa)
     
 
  0.933
Bra014068
AT1G47250 (E=1e-130) PAF2 | PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase (270 aa)
     
 
  0.933
Bra040561
AT1G53850 (E=5e-131) PAE1 | PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase (237 aa)
     
      0.923
Bra039695
AT1G53850 (E=2e-128) PAE1 | PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase (678 aa)
     
      0.923
Bra030921
AT1G53850 (E=5e-131) PAE1 | PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase (237 aa)
     
      0.923
Bra034316
AT2G27020 (E=3e-124) PAG1 | PAG1; endopeptidase/ peptidase/ threonine-type endopeptidase (249 aa)
     
      0.919
Bra024015
AT4G31300 (E=5e-127) PBA1 | PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (233 aa)
     
      0.918
Bra011257
AT4G31300 (E=7e-127) PBA1 | PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (233 aa)
     
      0.918
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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