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Bra001736 protein (Brassica rapa) - STRING interaction network
"Bra001736" - AT3G19150 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001736AT3G19150 (E=9e-016) KRP6, ICK4 | KRP6 (KIP-RELATED PROTEIN 6); cyclin binding / cyclin-dependent protein kinase inhibitor (177 aa)    
Predicted Functional Partners:
Bra018036
AT3G48750 (E=3e-166) CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1 | CDC2 (CELL DIVISION CONTROL 2); cyclin-dependent protein kinase/ kinase/ protein binding / protein kinase (294 aa)
       
 
  0.999
Bra011501
AT4G34160 (E=2e-149) CYCD3;1, CYCD3 | CYCD3;1 (CYCLIN D3;1); cyclin-dependent protein kinase regulator/ protein binding (373 aa)
       
 
  0.998
Bra030232
AT2G22490 (E=4e-127) CYCD2;1, ATCYCD2;1 | CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding (355 aa)
       
 
  0.998
Bra024383
AT5G65420 (E=3e-130) CYCD4;1 | CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator (308 aa)
       
 
  0.998
Bra009031
AT5G10440 (E=6e-111) CYCD4;2 | CYCD4;2 (cyclin d4;2); cyclin-dependent protein kinase (297 aa)
       
 
  0.998
Bra002947
AT5G54900 (E=4e-124) ATRBP45A | ATRBP45A (RNA-binding protein 45A); RNA binding (396 aa)
       
      0.998
Bra029917
AT3G48750 (E=3e-165) CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1 | CDC2 (CELL DIVISION CONTROL 2); cyclin-dependent protein kinase/ kinase/ protein binding / protein kinase (312 aa)
       
 
  0.985
Bra010752
AT4G14220 (E=1e-041) RHF1A | RHF1A (RING-H2 GROUP F1A); protein binding / ubiquitin-protein ligase/ zinc ion binding (320 aa)
       
 
  0.935
Bra034614
AT2G27960 (E=4e-040) CKS1, CKS1AT | CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1); cyclin-dependent protein kinase/ protein binding ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (88 aa)
       
 
  0.925
Bra034380
AT2G27970 (E=2e-037) CKS2 | CKS2 (CDK-subunit 2); cyclin-dependent protein kinase/ cyclin-dependent protein kinase regulator ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (81 aa)
       
 
  0.925
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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