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Bra001742 protein (Brassica rapa) - STRING interaction network
"Bra001742" - AT1G49720 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001742AT1G49720 (E=2e-100) ABF1 | ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1); DNA binding / protein binding / transcription activator/ transcription factor (355 aa)    
Predicted Functional Partners:
Bra017615
AT4G33950 (E=6e-188) OST1, SNRK2-6, SRK2E, SNRK2.6, P44 | OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase (362 aa)
       
  0.965
Bra011481
AT4G33950 (E=3e-191) OST1, SNRK2-6, SRK2E, SNRK2.6, P44 | OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase (362 aa)
       
  0.965
Bra012897
AT3G50500 (E=9e-184) SPK-2-2, SNRK2-2, SNRK2.2, SRK2D | SNRK2.2 (SNF1-RELATED PROTEIN KINASE 2.2); kinase/ protein kinase (361 aa)
       
  0.963
Bra003650
AT1G78290 (E=1e-155) | serine/threonine protein kinase, putative (478 aa)
       
  0.932
Bra018800
AT1G49720 (E=4e-065) ABF1 | ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1); DNA binding / protein binding / transcription activator/ transcription factor (368 aa)
       
 
0.916
Bra011485
AT4G34000 (E=1e-063) ABF3, DPBF5 | ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ transcription factor (439 aa)
       
 
0.913
Bra029160
AT5G51760 (E=2e-176) AHG1 | AHG1 (ABA-hypersensitive germination 1); catalytic/ protein serine/threonine phosphatase (418 aa)
       
 
  0.907
Bra018417
AT1G10940 (E=6e-179) ASK1, SNRK2-4, SNRK2.4, SRK2A | SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4); kinase (354 aa)
     
  0.905
Bra038652
AT5G63650 (E=3e-178) SNRK2-5, SNRK2.5, SRK2H | SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5); kinase (357 aa)
       
  0.902
Bra031475
AT1G60940 (E=4e-175) SNRK2-10, SNRK2.10, SRK2B | SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10); kinase (352 aa)
       
  0.902
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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