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Bra001776 protein (Brassica rapa) - STRING interaction network
"Bra001776" - AT3G20150 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001776AT3G20150 (E=0.0) | kinesin motor family protein (1234 aa)    
Predicted Functional Partners:
Bra004709
AT2G42580 (E=3e-140) TTL3, VIT | TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding (657 aa)
     
  0.820
Bra025176
AT3G25980 (E=3e-024) | mitotic spindle checkpoint protein, putative (MAD2) (95 aa)
     
  0.763
Bra017340
AT3G25980 (E=2e-112) | mitotic spindle checkpoint protein, putative (MAD2) (209 aa)
     
  0.763
Bra023054
AT2G36200 (E=1e-069) | kinesin motor protein-related (243 aa)
     
 
  0.729
Bra017256
AT2G36200 (E=0.0) | kinesin motor protein-related (1009 aa)
     
 
  0.729
Bra019815
AT1G13180 (E=1e-234) DIS1, ARP3, ATARP3 | DIS1 (DISTORTED TRICHOMES 1); ATP binding / actin binding / protein binding / structural constituent of cytoskeleton (427 aa)
       
  0.718
Bra016738
AT1G13180 (E=6e-235) DIS1, ARP3, ATARP3 | DIS1 (DISTORTED TRICHOMES 1); ATP binding / actin binding / protein binding / structural constituent of cytoskeleton (427 aa)
       
  0.718
Bra038950
AT5G33300 (E=9e-089) | chromosome-associated kinesin-related (481 aa)
     
 
  0.698
Bra035758
AT5G47820 (E=2e-040) FRA1 | FRA1 (FRAGILE FIBER 1); microtubule motor (283 aa)
     
 
  0.698
Bra035757
AT5G47820 (E=1e-060) FRA1 | FRA1 (FRAGILE FIBER 1); microtubule motor (284 aa)
     
 
  0.698
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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