STRINGSTRING
Bra001810 protein (Brassica rapa) - STRING interaction network
"Bra001810" - AT3G21070 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001810AT3G21070 (E=3e-251) NADK1 | NADK1 (NAD KINASE 1); NAD+ kinase/ NADH kinase/ calmodulin binding (542 aa)    
Predicted Functional Partners:
Bra035050
AT1G78590 (E=3e-162) NADK3, ATNADK-3 | NADK3 (NAD(H) KINASE 3); NAD+ kinase/ NADH kinase (317 aa)
         
  0.962
Bra037978
AT1G55090 (E=0.0) | carbon-nitrogen hydrolase family protein (742 aa)
   
 
  0.946
Bra030888
AT1G55090 (E=0.0) | carbon-nitrogen hydrolase family protein (736 aa)
   
 
  0.931
Bra028959
AT5G55810 (E=1e-114) AtNMNAT | AtNMNAT (A. thaliana nicotinate/nicotinamide mononucleotide adenyltransferase); nicotinamide-nucleotide adenylyltransferase/ nicotinate-nucleotide adenylyltransferase (238 aa)
   
 
  0.923
Bra017934
AT1G21640 (E=5e-311) NADK2, ATNADK2 | NADK2; NAD+ kinase/ calmodulin binding (970 aa)
         
0.904
Bra020083
AT5G20070 (E=1e-202) ATNUDT19, ATNUDX19 | ATNUDX19 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 19); hydrolase/ metal ion binding (402 aa)
     
 
    0.896
Bra008370
AT1G78590 (E=8e-159) NADK3, ATNADK-3 | NADK3 (NAD(H) KINASE 3); NAD+ kinase/ NADH kinase (317 aa)
         
  0.749
Bra002874
AT5G55810 (E=2e-098) AtNMNAT | AtNMNAT (A. thaliana nicotinate/nicotinamide mononucleotide adenyltransferase); nicotinamide-nucleotide adenylyltransferase/ nicotinate-nucleotide adenylyltransferase (203 aa)
   
 
  0.655
Bra004899
AT2G45330 (E=2e-090) emb1067 | emb1067 (embryo defective 1067); tRNA 2’-phosphotransferase/ transferase, transferring phosphorus-containing groups (778 aa)
         
  0.608
Bra027370
AT3G14150 (E=2e-166) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative (1001 aa)
         
  0.585
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (15%) [HD]