STRINGSTRING
Bra001865 protein (Brassica rapa) - STRING interaction network
"Bra001865" - AT3G22370 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001865AT3G22370 (E=6e-165) AOX1A, ATAOX1A | AOX1A (ALTERNATIVE OXIDASE 1A); alternative oxidase (346 aa)    
Predicted Functional Partners:
Bra029549
AT4G05020 (E=9e-299) NDB2 | NDB2 (NAD(P)H dehydrogenase B2); FAD binding / disulfide oxidoreductase/ oxidoreductase (579 aa)
     
   
  0.601
Bra023586
AT2G20800 (E=1e-285) NDB4 | NDB4 (NAD(P)H dehydrogenase B4); NADH dehydrogenase (564 aa)
           
  0.568
Bra006374
AT2G20800 (E=4e-291) NDB4 | NDB4 (NAD(P)H dehydrogenase B4); NADH dehydrogenase (574 aa)
           
  0.568
Bra014840
AT3G54110 (E=3e-162) ATPUMP1, UCP, PUMP1, ATUCP1, UCP1 | PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1); binding / oxidative phosphorylation uncoupler (305 aa)
           
  0.555
Bra007046
AT3G54110 (E=5e-165) ATPUMP1, UCP, PUMP1, ATUCP1, UCP1 | PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1); binding / oxidative phosphorylation uncoupler (305 aa)
           
  0.555
Bra003170
AT3G54110 (E=2e-164) ATPUMP1, UCP, PUMP1, ATUCP1, UCP1 | PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1); binding / oxidative phosphorylation uncoupler (304 aa)
           
  0.555
Bra033442
AT3G52300 (E=1e-089) ATPQ | ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL); hydrogen ion transmembrane transporter (168 aa)
           
  0.545
Bra012809
AT3G52300 (E=5e-081) ATPQ | ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL); hydrogen ion transmembrane transporter (168 aa)
           
  0.545
Bra006918
AT3G52300 (E=2e-080) ATPQ | ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL); hydrogen ion transmembrane transporter (168 aa)
           
  0.545
Bra024217
AT4G28220 (E=3e-279) NDB1 | NDB1 (NAD(P)H dehydrogenase B1); NADH dehydrogenase/ disulfide oxidoreductase (570 aa)
     
   
  0.532
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (11%) [HD]