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Bra001942 protein (Brassica rapa) - STRING interaction network
"Bra001942" - AT1G48520 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Bra001942AT1G48520 (E=2e-241) GATB | GATB (GLU-ADT SUBUNIT B); carbon-nitrogen ligase, with glutamine as amido-N-donor / glutaminyl-tRNA synthase (glutamine-hydrolyzing)/ ligase (531 aa)    
Predicted Functional Partners:
GATA
AT3G25660 (E=3e-220) | glutamyl-tRNA(Gln) amidotransferase, putative ; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (414 aa)
 
  0.998
Bra009383
AT5G09420 (E=2e-282) ATTOC64-V, MTOM64 | ATTOC64-V (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V); amidase/ binding / carbon-nitrogen ligase, with glutamine as amido-N-donor (923 aa)
 
  0.994
Bra031917
AT5G64440 (E=7e-285) AtFAAH | AtFAAH (Arabidopsis thaliana fatty acid amide hydrolase); N-(long-chain-acyl)ethanolamine deacylase/ amidase (613 aa)
 
  0.994
Bra026512
AT3G25660 (E=4e-014) | glutamyl-tRNA(Gln) amidotransferase, putative (181 aa)
 
  0.994
Bra009269
AT5G07360 (E=1e-308) | amidase family protein (647 aa)
 
  0.994
Bra001692
AT3G17970 (E=7e-267) atToc64-III | atToc64-III (Arabidopsis thaliana translocon at the outer membrane of chloroplasts 64-III); binding / carbon-nitrogen ligase, with glutamine as amido-N-donor (591 aa)
 
  0.993
Bra031652
AT1G08980 (E=3e-182) ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase (421 aa)
 
  0.993
Bra018737
AT3G17970 (E=3e-258) atToc64-III | atToc64-III (Arabidopsis thaliana translocon at the outer membrane of chloroplasts 64-III); binding / carbon-nitrogen ligase, with glutamine as amido-N-donor (601 aa)
 
  0.993
Bra011569
AT4G34880 (E=3e-072) | amidase family protein (364 aa)
 
  0.993
Bra022128
AT4G34880 (E=1e-121) | amidase family protein (497 aa)
 
  0.992
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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