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Bra001946 protein (Brassica rapa) - STRING interaction network
"Bra001946" - AT3G24360 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001946AT3G24360 (E=4e-190) | enoyl-CoA hydratase/isomerase family protein (423 aa)    
Predicted Functional Partners:
Bra036771
AT1G36160 (E=0.0) ACC1, AT-ACC1, EMB22, GK, PAS3 | ACC1 (ACETYL-COENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase (2233 aa)
   
 
  0.985
Bra018702
AT1G36180 (E=0.0) ACC2 | ACC2 (ACETYL-COA CARBOXYLASE 2); acetyl-CoA carboxylase (2310 aa)
   
 
  0.985
Bra036142
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (729 aa)
   
 
  0.927
Bra020639
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (608 aa)
   
 
  0.927
Bra020875
AT4G20930 (E=4e-164) | 3-hydroxyisobutyrate dehydrogenase, putative (351 aa)
   
 
  0.911
Bra022298
AT3G18240 (E=3e-181) | unknown protein (424 aa)
     
      0.900
Bra027724
AT1G64600 (E=4e-249) | copper ion binding / methyltransferase (547 aa)
       
      0.900
Bra026020
AT1G16870 (E=8e-213) | mitochondrial 28S ribosomal protein S29-related (485 aa)
     
      0.899
Bra016628
AT1G16870 (E=1e-037) | mitochondrial 28S ribosomal protein S29-related (135 aa)
     
      0.899
Bra037501
AT5G48230 (E=3e-211) EMB1276, ACAT2 | ACAT2 (ACETOACETYL-COA THIOLASE 2); acetyl-CoA C-acetyltransferase/ catalytic (425 aa)
   
  0.894
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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