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Bra001979 protein (Brassica rapa) - STRING interaction network
"Bra001979" - AT2G16530 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra001979AT2G16530 (E=3e-044) | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein (283 aa)    
Predicted Functional Partners:
Bra023548
AT5G16010 (E=6e-073) | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein (274 aa)
         
0.597
Bra008657
AT5G16010 (E=2e-107) | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein (274 aa)
         
0.596
Bra006336
AT5G16010 (E=2e-103) | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein (271 aa)
         
0.596
Bra017142
AT2G38050 (E=1e-096) DET2, DWF6, ATDET2 | DET2 (DE-ETIOLATED 2); sterol 5-alpha reductase (206 aa)
         
0.592
Bra022947
AT2G33630 (E=8e-258) | 3-beta hydroxysteroid dehydrogenase/isomerase family protein (480 aa)
         
  0.531
Bra015743
AT2G33630 (E=6e-104) | 3-beta hydroxysteroid dehydrogenase/isomerase family protein (472 aa)
         
  0.531
Bra015621
AT1G47290 (E=2e-204) AT3BETAHSD/D1 | AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1); 3-beta-hydroxy-delta5-steroid dehydrogenase/ sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) (432 aa)
         
  0.531
Bra007764
AT2G26260 (E=2e-131) AT3BETAHSD/D2 | AT3BETAHSD/D2 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2); 3-beta-hydroxy-delta5-steroid dehydrogenase/ sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) (338 aa)
         
  0.531
Bra004762
AT2G43420 (E=1e-244) | 3-beta hydroxysteroid dehydrogenase/isomerase family protein (565 aa)
         
  0.531
Bra040821
AT3G26300 (E=8e-237) CYP71B34 | CYP71B34; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (502 aa)
         
  0.531
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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