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Bra001985 protein (Brassica rapa) - STRING interaction network
"Bra001985" - AT1G09830 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Bra001985AT1G09830 (E=3e-044) | phosphoribosylamine--glycine ligase (PUR2) (207 aa)    
Predicted Functional Partners:
Bra003809
AT1G74260 (E=0.0) PUR4 | PUR4 (purine biosynthesis 4); ATP binding / catalytic/ phosphoribosylformylglycinamidine synthase (1380 aa)
 
  0.999
Bra015924
AT1G74260 (E=0.0) PUR4 | PUR4 (purine biosynthesis 4); ATP binding / catalytic/ phosphoribosylformylglycinamidine synthase (1516 aa)
 
  0.999
Bra000013
AT2G37690 (E=7e-303) | phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative (671 aa)
 
  0.999
Bra017161
AT2G37690 (E=0.0) | phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative (691 aa)
 
  0.999
Bra037583
AT1G74260 (E=4e-066) PUR4 | PUR4 (purine biosynthesis 4); ATP binding / catalytic/ phosphoribosylformylglycinamidine synthase (850 aa)
   
  0.998
Bra005371
AT2G35040 (E=8e-217) | AICARFT/IMPCHase bienzyme family protein (756 aa)
 
  0.996
Bra038030
AT2G35040 (E=8e-070) | AICARFT/IMPCHase bienzyme family protein (345 aa)
 
  0.996
Bra021969
AT2G35040 (E=4e-017) | AICARFT/IMPCHase bienzyme family protein (185 aa)
   
  0.995
Bra021944
AT2G35040 (E=1e-014) | AICARFT/IMPCHase bienzyme family protein (83 aa)
   
  0.995
Bra019596
AT2G35040 (E=4e-018) | AICARFT/IMPCHase bienzyme family protein (163 aa)
   
  0.995
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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