STRINGSTRING
Bra002022 protein (Brassica rapa) - STRING interaction network
"Bra002022" - AT2G13100 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002022AT2G13100 (E=7e-230) | glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative (498 aa)    
Predicted Functional Partners:
Bra019074
AT1G67000 (E=1e-192) | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (825 aa)
   
   
  0.627
Bra032004
AT3G03250 (E=2e-212) UGP | UGP (UDP-glucose pyrophosphorylase); UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase (434 aa)
       
 
  0.625
Bra006395
AT5G17310 (E=2e-244) | UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative (470 aa)
       
 
  0.625
Bra038405
AT1G31070 (E=6e-279) | UDP-N-acetylglucosamine pyrophosphorylase-related (503 aa)
       
      0.616
Bra023160
AT1G31070 (E=3e-272) | UDP-N-acetylglucosamine pyrophosphorylase-related (476 aa)
       
      0.616
Bra007797
AT5G52560 (E=0.0) ATUSP | ATUSP (ARABIDOPSIS THALIANA UDP-SUGAR PYROPHOSPHORYLASE); UTP-monosaccharide-1-phosphate uridylyltransferase/ UTP-arabinose-1-phosphate uridylyltransferase/ UTP-galactose-1-phosphate uridylyltransferase/ UTP-glucose-1-phosphate uridylyltransferase/ UTP-xy (618 aa)
       
      0.616
Bra005373
AT2G35020 (E=8e-245) | UTP--glucose-1-phosphate uridylyltransferase family protein (501 aa)
       
      0.616
Bra040704
AT3G02040 (E=1e-173) SRG3 | SRG3 (senescence-related gene 3); glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase (367 aa)
   
   
  0.524
Bra035967
AT5G43300 (E=7e-167) | glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase (365 aa)
   
   
  0.524
Bra035774
AT3G20520 (E=2e-296) SVL3 | SVL3 (SHV3-LIKE 3); glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase (817 aa)
   
   
  0.524
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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