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Bra002041 protein (Brassica rapa) - STRING interaction network
"Bra002041" - AT3G11430 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002041AT3G11430 (E=4e-249) ATGPAT5, GPAT5 | GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase/ organic anion transmembrane transporter (503 aa)    
Predicted Functional Partners:
Bra022365
AT3G18850 (E=8e-182) LPAT5 | LPAT5; acyltransferase (346 aa)
         
  0.900
Bra008174
AT1G75020 (E=6e-172) LPAT4 | LPAT4 (LYSOPHOSPHATIDYL ACYLTRANSFERASE 4); acyltransferase (382 aa)
         
  0.898
Bra003775
AT1G75020 (E=3e-171) LPAT4 | LPAT4 (LYSOPHOSPHATIDYL ACYLTRANSFERASE 4); acyltransferase (380 aa)
         
  0.898
Bra034109
AT3G10370 (E=0.0) SDP6 | SDP6 (SUGAR-DEPENDENT 6); glycerol-3-phosphate dehydrogenase (630 aa)
         
  0.897
Bra029833
AT3G10370 (E=0.0) SDP6 | SDP6 (SUGAR-DEPENDENT 6); glycerol-3-phosphate dehydrogenase (631 aa)
         
  0.897
Bra007344
AT3G57650 (E=9e-216) LPAT2 | LPAT2; 1-acylglycerol-3-phosphate O-acyltransferase (390 aa)
         
  0.896
Bra003292
AT3G57650 (E=2e-213) LPAT2 | LPAT2; 1-acylglycerol-3-phosphate O-acyltransferase (390 aa)
         
  0.896
Bra024062
AT4G30580 (E=6e-152) ATS2, EMB1995 | ATS2; 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase (384 aa)
         
  0.896
Bra035512
AT1G32200 (E=2e-218) ATS1, ACT1 | ATS1; glycerol-3-phosphate O-acyltransferase (454 aa)
         
  0.702
Bra033846
AT1G32200 (E=3e-205) ATS1, ACT1 | ATS1; glycerol-3-phosphate O-acyltransferase (440 aa)
         
  0.683
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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