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Bra002043 protein (Brassica rapa) - STRING interaction network
"Bra002043" - AT3G11490 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002043AT3G11490 (E=4e-101) | rac GTPase activating protein, putative (492 aa)    
Predicted Functional Partners:
Bra038734
AT3G12580 (E=0.0) HSP70 | HSP70 (heat shock protein 70); ATP binding (650 aa)
     
  0.869
Bra035909
AT5G02500 (E=3e-215) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (572 aa)
     
  0.869
Bra035470
AT5G02500 (E=6e-191) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (596 aa)
     
  0.869
Bra034104
AT5G02500 (E=9e-054) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (121 aa)
     
  0.869
Bra026084
AT1G16030 (E=0.0) Hsp70b | Hsp70b (heat shock protein 70B); ATP binding (647 aa)
     
  0.869
Bra024699
AT5G02500 (E=8e-263) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (584 aa)
     
  0.869
Bra018725
AT5G02500 (E=2e-098) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (345 aa)
     
  0.869
Bra016644
AT1G16030 (E=0.0) Hsp70b | Hsp70b (heat shock protein 70B); ATP binding (650 aa)
     
  0.869
Bra013046
AT5G02500 (E=6e-225) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (546 aa)
     
  0.869
Bra013045
AT5G02490 (E=5e-039) | heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2) (96 aa)
     
  0.869
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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