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Bra002260 protein (Brassica rapa) - STRING interaction network
"Bra002260" - AT5G19770 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Bra002260AT5G19770 (E=3e-139) TUA3 | TUA3; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (410 aa)    
Predicted Functional Partners:
Bra003116
AT5G44340 (E=6e-072) TUB4 | TUB4; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (233 aa)
     
0.985
Bra003116.1-P
AT5G44340 (E=6e-072) TUB4 | TUB4; structural constituent of cytoskeleton (233 aa)
     
0.985
Bra005395
AT1G75780 (E=3e-115) TUB1 | TUB1; GTP binding / GTPase/ structural molecule ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (403 aa)
     
0.985
Bra041172
AT5G12250 (E=3e-070) TUB6 | TUB6 (BETA-6 TUBULIN); structural constituent of cytoskeleton (135 aa)
     
0.985
Bra033737
AT5G44340 (E=9e-245) TUB4 | TUB4; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (445 aa)
     
0.985
Bra013481
AT4G20890 (E=3e-242) TUB9 | TUB9; GTP binding / GTPase/ structural molecule ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (446 aa)
     
0.985
Bra039506
AT5G44340 (E=5e-246) TUB4 | TUB4; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (446 aa)
     
0.985
Bra027544
AT5G44340 (E=5e-246) TUB4 | TUB4; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (445 aa)
     
0.985
Bra038795
AT4G20890 (E=3e-241) TUB9 | TUB9; GTP binding / GTPase/ structural molecule ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (445 aa)
     
0.985
Bra008903
AT5G12250 (E=2e-248) TUB6 | TUB6 (BETA-6 TUBULIN); structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (448 aa)
     
0.985
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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